Are you frustrated with vector database retrieval accuracy for long professional documents? Traditional vector-based RAG relies on semantic similarity rather than true relevance. But similarity ≠ relevance — what we truly need in retrieval is relevance, and that requires reasoning. When working with professional documents that demand domain expertise and multi-step reasoning, similarity search often falls short — missing what's relevant but not similar, and returning what's similar yet not relevant.

Inspired by AlphaGo, we propose PageIndex — a vectorless, reasoning-based RAG system that builds a hierarchical tree index from long documents and uses LLMs to reason over that index for agentic, context-aware retrieval. The retrieval is traceable and explainable, with no vector DBs or chunking. PageIndex simulates how human experts navigate and extract knowledge from complex documents through tree search, enabling LLMs to think and reason their way to the most relevant document sections. It performs retrieval in two steps:

1. Generate a “Table-of-Contents” tree structure index of documents
2. Perform reasoning-based retrieval through tree search

🎯 Core Features

Compared to traditional vector-based RAG, PageIndex features:

• No Vector DB: Uses document structure and LLM reasoning for retrieval, instead of vector similarity search.
• No Chunking: Documents are organized into natural sections, not artificial chunks.
• Better Traceability & Explainability: Retrieval is reasoning-driven and grounded in explicit page and section references, making every result traceable and interpretable — no more “vibe retrieval” with opaque, approximate vector search.
• Context-Aware Retrieval: Retrieval depends on your full context (e.g., conversation history and domain knowledge), and easily incorporates new context.
• Human-like Retrieval: Simulates how human experts navigate and extract knowledge from complex documents.

PageIndex powers a reasoning-based RAG system that achieved state-of-the-art 98.7% accuracy on FinanceBench, vastly outperforming vector-based RAG solutions on professional document analysis (blog post).

📍 Explore PageIndex

To learn more, please see a detailed introduction to the PageIndex framework. Check out our GitHub for open-source code, and the cookbooks, tutorials, and blog for more usage guides and examples.

The PageIndex service is available as a ChatGPT-style chat platform, or can be integrated via MCP or API, with enterprise deployment available.

🛠️ Deployment Options

• Self-host — run locally with this open-source repo (using standard PDF parsing).
• Cloud Service — production-grade pipeline with enhanced OCR, tree building, and retrieval for best results. Try instantly on our Chat Platform, or integrate via MCP or API.
• Enterprise — dedicated or private deployment (VPC, on-prem). Contact us or book a demo to learn more.

🧪 Quick Hands-on

• 🔥 Agentic Vectorless RAG (latest) — a simple but complete agentic vectorless RAG example with self-hosted PageIndex, using OpenAI Agents SDK.
• Try the Vectorless RAG notebook — a minimal, hands-on example of reasoning-based RAG using PageIndex.
• Check out Vision-based Vectorless RAG — no OCR; a minimal, vision-based & reasoning-native RAG pipeline that works directly over page images.

🌲 PageIndex Tree Structure

PageIndex can transform lengthy PDF documents into a semantic tree structure, similar to a “table of contents” but optimized for use with Large Language Models (LLMs). It's ideal for: financial reports, regulatory filings, academic textbooks, legal or technical manuals, and any document that exceeds LLM context limits.

Below is an example PageIndex tree structure. Also see more example documents and generated tree structures.

...
{
  "title": "Financial Stability",
  "node_id": "0006",
  "start_index": 21,
  "end_index": 22,
  "summary": "The Federal Reserve ...",
  "nodes": [
    {
      "title": "Monitoring Financial Vulnerabilities",
      "node_id": "0007",
      "start_index": 22,
      "end_index": 28,
      "summary": "The Federal Reserve's monitoring ..."
    },
    {
      "title": "Domestic and International Cooperation and Coordination",
      "node_id": "0008",
      "start_index": 28,
      "end_index": 31,
      "summary": "In 2023, the Federal Reserve collaborated ..."
    }
  ]
}
...

You can generate the PageIndex tree structure with this open-source repo; or use our API for higher-quality results powered by our enhanced OCR and tree building pipeline.

⚙️ Package Usage

Note: This package uses standard PDF parsing. For use cases with complex PDFs, our cloud service (via MCP and API) offers enhanced OCR, tree building, and retrieval.

You can follow these steps to generate a PageIndex tree from a PDF document.

1. Install dependencies

pip3 install --upgrade -r requirements.txt

2. Set your LLM API key

Create a .env file in the root directory with your LLM API key. Multi-LLM is supported via LiteLLM:

OPENAI_API_KEY=your_openai_key_here

3. Generate PageIndex structure for your PDF

python3 run_pageindex.py --pdf_path /path/to/your/document.pdf

Agentic Vectorless RAG: An Example

For a simple, end-to-end agentic vectorless RAG example using self-hosted PageIndex (with OpenAI Agents SDK), see examples/agentic_vectorless_rag_demo.py.

# Install optional dependency
pip3 install openai-agents

# Run the demo
python3 examples/agentic_vectorless_rag_demo.py

📈 Case Study: PageIndex Leads Finance QA Benchmark

Mafin 2.5 is a reasoning-based RAG system for financial document analysis, powered by PageIndex. It achieved a state-of-the-art 98.7% accuracy on the FinanceBench benchmark, significantly outperforming traditional vector-based RAG systems.

PageIndex's hierarchical indexing and reasoning-driven retrieval enable precise navigation and extraction of relevant context from complex financial reports, such as SEC filings and earnings disclosures.

Explore the full benchmark results and our blog post for detailed comparisons and performance metrics.

🧭 Resources

• 📝 Blog: technical articles, research insights, and product updates.
• 🔧 Developer: MCP setup, API docs, and integration guides.
• 🧪 Cookbooks: hands-on, runnable examples and advanced use cases.
• 📖 Tutorials: practical guides and strategies, including Document Search and Tree Search.

⭐ Support Us

Leave us a star 🌟 if you like our project. Thank you!

Please cite this work as:

Mingtian Zhang, Yu Tang and PageIndex Team,
"PageIndex: Next-Generation Vectorless, Reasoning-based RAG",
PageIndex Blog, Sep 2025.

🌐 Open-Source Ecosystem

PageIndex anchors a growing open-source ecosystem of long-context AI infra — OpenKB is an LLM knowledge base that compiles documents into an interlinked wiki. ChatIndex provides tree indexing and retrieval for long conversational histories and memory. ConDB is a KV-cache native context database for tree-based retrieval at scale. PageIndex MCP is PageIndex's MCP server.

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